Preliminary Draft 2004-2005

Leaders in Learning - Biochemistry
Preliminary Draft 2004-2005

Please review the Preliminary Draft Guide for instructions in using this list.

Department Authors

AINSWORTH, P.J.	HUDSON, R.H.E.	POSSMAYER, F.
BEHME, M.T.	HUFF, M.W.	RODENHISER, D.I.
DIMATTIA, G.E.	HUNTER, G.K.	ROZMAHEL, R.
DUNN, S.D.	KARI, L.	RUPAR, C.A.
EDGELL, D.R.	LAJOIE, G.	SHAW, G.S.
GLOOR, G.B.	LITCHFIELD, D.W.	SHILTON, B.H.
GOLDBERG, H.A.	MA, B.	SKERJANC, I.S.
GRANT, C.W.	MCLACHLIN, D.T.	TREVITHICK, J.R.
HAN, V.K.M.	MEAKIN, S.O.	TURLEY, E.A.
HANIFORD, D.B.	PETERSEN, N.O.	YEUNG, K.K.C.
HEGELE, R.A.	PICKERING, J.G.	ZHANG, K.Z.

Use the back arrow to return to this list after selecting an author.

Please Note: "Type" is listed for your information and will not be included in the final bibliography. Please submit a correction if the type is incorrect for an entry.

Publications

Ainsworth, P.J.

Ainsworth, P.J., D. Koscinski, B.P. Fraser, and J.A. Stuart. 2004 - Sept. Family Cancer Histories Predictive of a High Risk of Hereditary Non-Polyposis Colorectal Cancer Associate Significantly With a Genomic Rearrangement in Hmsh2 or Hmlh1. Clinical Genetics 66 (3): 183-188.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Vanhorne, J.B., S.D. Andrew, K.J. Harrison, S.A.M. Taylor, B. Thomas, T.J. Mcdonald, P.J. Ainsworth, and L.M. Mulligan. 2005 - Feb. A Model for Gfr Alpha 4 Function and a Potential Modifying Role in Multiple Endocrine Neoplasia 2. Oncogene 24 (6): 1091-1097.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Behme, M.T.

Dupre, J., M.T. Behme, and T.J. Mcdonald. 2004 - July. Exendin-4 Normalized Postcibal Glycemic Excursions in Type 1 Diabetes. Journal of Clinical Endocrinology and Metabolism 89 (7): 3469-3473.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Dimattia, G.E.

Gagliardi, A.D., E.Y.W. Kuo, S. Raulic, G.F. Wagner, and G.E. Dimattia. 2005 - Jan. Human Stanniocalcin-2 Exhibits Potent Growth-Suppressive Properties in Transgenic Mice Independently of Growth Hormone and Igfs. American Journal of Physiology-Endocrinology and Metabolism 288 (1): E92-E105.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Paciga, M., G.E. Dimattia, and G.F. Wagner. 2004 - Sept. Regulation of Luteal Cell Big Stanniocalcin Production and Secretion. Endocrinology 145 (9): 4204-4212.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Dunn, S.D.

Cipriano, D.J. and S.D. Dunn. 2004 - July. N-Terminal Fusions to the Epsilon Subunit of Atp Synthase. Biochimica Et Biophysica Acta-Bioenergetics 1658 (Suppl. S): 104.
Type: Abstract

Gloor, G.B., L.C. Martin, L.M. Wahl, and S.D. Dunn. 2005 - May. Mutual Information in Protein Multiple Sequence Alignments Reveals Two Classes of Coevolving Positions. Biochemistry 44 (19): 7156-7165.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Motz, C., T. Hornung, M. Kersten, D.T. Mclachlin, S.D. Dunn, J.G. Wise, and P.D. Vogel. 2004 - Nov. The Subunit B Dimer of the Fof1-Atp Synthase Interaction With F-1-Atpase as Deduced by Site-Specific Spin-Labeling. Journal of Biological Chemistry 279 (47): 49074-49081.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Vogel, P.D., T. Hornung, D.T. Mclachlin, S.D. Dunn, E.J. Hustedt, and J.G. Wise. 2005 - Jan. The Second Stalk of the Fof1-Atpsynthase. Biophysical Journal 88 (1): 50A.
Type: Abstract

Edgell, D.R.

Sebulsky, M.T., C.D. Speziali, B.H. Shilton, D.R. Edgell, and D.E. Heinrichs. 2004 - Dec. Fhud1, a Ferric Hydroxamate-Binding Lipoprotein in Staphylococcus Aureus - a Case of Gene Duplication and Lateral Transfer. Journal of Biological Chemistry 279 (51): 53152-53159.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Gloor, G.B.

Dempsey, B.R., M. Wrona, J.M. Moulin, G.B. Gloor, F. Jalilehvand, G. Lajoie, G.S. Shaw, and B.H. Shilton. 2004 - July. Solution Nmr Structure and X-Ray Absorption Analysis of the C-Terminal Zinc-Binding Domain of the Seca Atpase. Biochemistry 43 (29): 9361-9371.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Goldberg, H.A.

Keykhosravani, M., A. Doherty-Kirby, C.J. Zhang, D. Brewer, H.A. Goldberg, G.K. Hunter, and G. Lajoie. 2005 - May. Comprehensive Identification of Post-Translational Modifications of Rat Bone Osteopontin by Mass Spectrometry. Biochemistry 44 (18): 6990-7003.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Nanci, A., R.M. Wazen, S.F. Zalzal, M. Fortin, H.A. Goldberg, G.K. Hunter, and D.L. Ghitescu. 2004 - Dec. A Tracer Study With Systemically and Locally Administered Dinitrophenylated Osteopontin. Journal of Histochemistry & Cytochemistry 52 (12): 1591-1600.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Takayama, T., N. Suzuki, M. Narukawa, H.A. Goldberg, K. Otsuka, and K. Ito. 2005 - Jan. Enamel Matrix Derivative Is a Potent Inhibitor of Breast Cancer Cell Attachment to Bone. Life Sciences 76 (11): 1211-1221.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Tye, C.E., G.K. Hunter, and H.A. Goldberg. 2005 - Apr. Identification of the Type I Collagen-Binding Domain of Bone Sialoprotein and Characterization of the Mechanism of Interaction. Journal of Biological Chemistry 280 (14): 13487-13492.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Grant, C.W.

Goodyear, D.J., S. Sharpe, C.W.M. Grant, and M.R. Morrow. 2005 - Jan. Molecular Dynamics Simulation of Transmembrane Polypeptide Orientational Fluctuations. Biophysical Journal 88 (1): 105-117.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Han, V.K.M.

Cingel-Ristic, V., B.F. Schrijvers, A.K. Van Vliet, R. Rasch, V.K.M. Han, S.L.S. Drop, and A. Flyvbjerg. 2005 - Feb. Kidney Growth in Normal and Diabetic Mice Is Not Affected by Human Insulin-Like Growth Factor Binding Protein-1 Administration. Experimental Biology and Medicine 230 (2): 135-143.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Croy, B.A., J.K. Kastikainen, V. Han, P.A. Smith, I. Caniggia, G. Smith, C. Sullivan, D. Hilchie, and C. Tayade. 2004 - Sept.-2004 - Oct. Human Placental Tissue Engraftment in Immune Deficient and Immune Competent Mice. Placenta 25 (8-9): A20.
Type: Abstract

Jasinska, A., V. Han, A.T. Fazleabas, and J.J. Kim. 2004 - Sept. Induction of Insulin-Like Growth Factor Binding Protein-1 Expression in Baboon Endometrial Stromal Cells by Cells of Trophoblast Origin. Journal of the Society for Gynecologic Investigation 11 (6): 399-405.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Vasileiadis, G.T., N. Gelman, V.K.M. Han, L.A. Williams, R. Mann, Y. Bureau, and R.T. Thompson. 2004 - Sept. Uncomplicated Intraventricular Hemorrhage Is Followed by Reduced Cortical Volume at Near-Term Age. Pediatrics 114 (3): E367-E372.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Watson, C.S., A.D. Bocking, V.K.M. Han, and S.L. Adamson. 2005 - Feb. Adult Cardiovascular Function in Intrauterine Growth-Restricted (Iugr) Transgenic Mice. Journal of the Society for Gynecologic Investigation 12 (2): 177A.
Type: Abstract

Williams, L.A., N. Gelman, P.A. Picot, D.S. Lee, J.R. Ewing, V.K. Han, and R.T. Thompson. 2005 - May. Neonatal Brain: Regional Variability of in Vivo Mr Imaging Relaxation Rates at 3.0 T-Initial Experience. Radiology 235 (2): 595-603.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Zygmunt, M., T. Mckinnon, F. Herr, P.K. Lala, and V.K.M. Han. 2005 - Apr. Hcg Increases Trophoblast Migration in Vitro Via the Insulin-Like Growth Factor-Ii/Mannose-6 Phosphate Receptor. Molecular Human Reproduction 11 (4): 261-267.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Haniford, D.B.

Humayun, S., S.J. Wardle, B.H. Shilton, P.A. Pribil, J. Liburd, and D.B. Haniford. 2005 - Feb. Tn10 Transposase Mutants With Altered Transpososome Unfolding Properties Are Defective in Hairpin Formation. Journal of Molecular Biology 346 (3): 703-716.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Hegele, R.A.

Al-Shali, K., H.N. Cao, N. Knoers, A.R. Hermus, C.J. Tack, and R.A. Hegele. 2004 - Nov. A Single-Base Mutation in the Peroxisome Proliferator-Activated Receptor Gamma 4 Promoter Associated With Altered in Vitro Expression and Partial Lipodystrophy. Journal of Clinical Endocrinology and Metabolism 89 (11): 5655-5660.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Al-Shali, K., A.A. House, A.J.G. Hanley, H.M.R. Khan, S.B. Harris, M. Mamakeesick, B. Zinman, A. Fenster, J.D. Spence, and R.A. Hegele. 2005 - Feb. Differences Between Carotid Wall Morphological Phenotypes Measured by Ultrasound in One, Two and Three Dimensions. Atherosclerosis 178 (2): 319-325.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Al-Shali, K.Z., A.A. House, A.J.G. Hanley, H.M.R. Khan, S.B. Harris, B. Zinman, M. Mamakeesick, A. Fenster, J.D. Spence, and R.A. Hegele. 2004 - Sept. Genetic Variation in Pparg Encoding Peroxisome Proliferator-Activated Receptor Gamma Associated With Carotid Atherosclerosis. Stroke 35 (9): 2036-2040.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Argmann, C.A., J.Y. Edwards, C.G. Sawyez, C.H. O'neil, R.A. Hegele, J.G. Pickering, and M.W. Huff. 2005 - June. Regulation of Macrophage Cholesterol Efflux Through Hydroxymethylglutaryl-Coa Reductase Inhibition. Journal of Biological Chemistry 280 (23): 22212-22221.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Argmann, C.A., C.G. Sawyez, S.H. Li, Z.X. Nong, R.A. Hegele, J.G. Pickering, and M.W. Huff. 2004 - July. Human Smooth Muscle Cell Subpopulations Differentially Accumulate Cholesteryl Ester When Exposed to Native and Oxidized Lipoproteins. Arteriosclerosis Thrombosis and Vascular Biology 24 (7): 1290-1296.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Mckinney, J.L., D.J. Murdoch, J. Wang, J. Robinson, C. Biltcliffe, H.M.R. Khan, P.M. Walker, J. Savage, I. Skerjanc, and R.A. Hegele. 2004 - Nov. Venn Analysis as Part of a Bioinformatic Approach to Prioritize Expressed Sequence Tags From Cardiac Libraries. Clinical Biochemistry 37 (11): 953-960.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Segev, A., R.A. Hegele, H.K. Lau, J.D. Sparkes, J.M. Teitel, R.J. Chisholm, and B.H. Strauss. 2004. Thr325ile Polymorphism of the Tafi Gene Is Related to Tafi Antigen Plasma Levels and Angiographic Restenosis After Percutaneous Coronary Interventions. Thrombosis Research 114 (2): 137-141.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Tadiboyina, V.T., A. Rupar, P. Atkison, A. Feigenbaum, J. Kronick, J. Wang, and R.A. Hegele. 2005 - June. Novel Mutation in Dguok in Hepatocerebral Mitochondrial Dna Depletion Syndrome Associated With Cystathioninuria. American Journal of Medical Genetics Part a 135A (3): 289-291.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Venance, S.L., W.J. Koopman, B.A. Miskie, R.A. Hegele, and A.F. Hahn. 2005 - Jan. Rigid Spine Muscular Dystrophy Due to Sepn1 Mutation Presenting as Cor Pulmonale. Neurology 64 (2): 395-396. Editorial Material.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Walker, B.D., A.D. Krahn, G.J. Klein, A.C. Skanes, R. Yee, J. Wang, and R.A. Hegele. 2005 - Jan. Effect of Change in Posture and Exercise on Repolarization in Patients With Long Qt Syndrome With Herg Channel Mutations. Canadian Journal of Cardiology 21 (1): 33-38.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Wang, J., T. Joy, D. Mymin, J. Frohlich, and R.A. Hegele. 2004 - Dec. Phenotypic Heterogeneity of Sitosterolemia. Journal of Lipid Research 45 (12): 2361-2367.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Wang, J., J.F. Robinson, H.M.R. Khan, D.E. Carter, J. Mckinney, B.A. Miskie, and R.A. Hegele. 2004 - Sept. Optimizing Rna Extraction Yield From Whole Blood for Microarray Gene Expression Analysis. Clinical Biochemistry 37 (9): 741-744.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Hudson, R.H.E.

Hudson, R.H.E., A.K. Dambenieks, and R.D. Viirre. 2004 - Nov. Fluorescent 7-Deazapurine Derivatives From 5-Iodocytosine Via a Tandem Cross-Coupling-Annulation Reaction With Terminal Alkynes. Synlett (13): 2400-2402.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Hudson, R.H.E., M. Goncharenko, A.P. Wallman, and F. Wojciechowski. 2005 - June. Pna-Directed Triple-Helix Formation by N-7-Xanthine. Synlett (9): 1442-1446.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Hudson, R.H.E., R.D. Viirre, Y.H. Liu, F. Wojciechowski, and A.K. Dambenieks. 2004 - July-2004 - Aug. Chemistry for the Synthesis of Nucleobase-Modified Peptide Nucleic Acid. Pure and Applied Chemistry 76 (7-8): 1591-1598.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Huff, M.W.

Allister, E.M., N.M. Borradaile, J.Y. Edwards, and M.W. Huff. 2005 - June. Inhibition of Microsomal Triglyceride Transfer Protein Expression and Apolipoprotein B100 Secretion by the Citrus Flavonoid Naringenin and by Insulin Involves Activation of the Mitogen-Activated Protein Kinase Pathway in Hepatocytes. Diabetes 54 (6): 1676-1683.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Hunter, G.K.

Kari, L.

Freund, R., L. Kari, M. Oswald, and P. Sosik. 2005 - Feb. Computationally Universal P Systems Without Priorities: Two Catalysts Are Sufficient. Theoretical Computer Science 330 (2): 251-266.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Kari, L., and S. Konstantinidis. 2005 - Feb. Language Equations, Maximality and Error-Detection. Journal of Computer and System Sciences 70 (1): 157-178.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Kari, L., S. Konstantinidis, and P. Sosik. 2005. Bond-Free Languages: Formalizations, Maximality and Construction Methods. Dna Computing. Lecture Notes in Computer Science. 3384. 169-181.
Type: Conference Proceedings

Kari, L., S. Konstantinidis, and P. Sosik. 2005 - Apr. On Properties of Bond-Free Dna Languages. Theoretical Computer Science 334 (1-3): 131-159.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Kari, L., S. Konstantinidis, and P. Sosik. 2005 - June. Operations on Trajectories With Applications to Coding and Bioinformatics. International Journal of Foundations of Computer Science 16 (3): 531-546.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Kari, L., S. Konstantinidis, and P. Sosik. 2005. Preventing Undesirable Bonds Between Dna Codewords. Dna Computing. Lecture Notes in Computer Science. 3384. 182-191.
Type: Conference Proceedings

Kari, L., S. Konstantinidis, and P. Sosik. 2004. Substitution on Trajectories. Theory Is Forever: Essays Dedicated to Arto Salomaa on the Occasion of His 70th Birthday 3113: 145-158.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Kari, L., S. Konstantinidis, and P. Sosik. 2005. Substitutions, Trajectories and Noisy Channels. Implementation and Application of Automata 3317: 202-212.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Kari, L., S. Konstantinidis, P. Sosik, and G. Thierrin. 2005. On Hairpin-Free Words and Languages. Developments in Language Theory, Proceedings. Lecture Notes in Computer Science. 3572. 296-307.
Type: Conference Proceedings

Kari, L., C. Martin-Vide, and A. Paun. 2004. On the Universality of P Systems With Minimal Symport/Antiport Rules. Aspects of Molecular Computing 2950: 254-265.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Kari, L., and P. Sosik. 2005 - Feb. Aspects of Shuffle and Deletion on Trajectories. Theoretical Computer Science 332 (1-3): 47-61.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Wang, Y.W., K. Hill, S. Singh, and L. Kari. 2005 - Feb. The Spectrum of Genomic Signatures: From Dinucleotides to Chaos Game Representation. Gene 346: 173-185.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Lajoie, G.

Canton, D.A., M.E.K. Olsten, K. Kim, A. Doherty-Kirby, G. Lajoie, J.A. Cooper, and D.W. Litchfield. 2005 - May. The Pleckstrin Homology Domain-Containing Protein Ckip-1 Is Involved in Regulation of Cell Morphology and the Actin Cytoskeleton and Interaction With Actin Capping Protein. Molecular and Cellular Biology 25 (9): 3519-3534.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Dobransky, T., A. Doherty-Kirby, A.R. Kim, D. Brewer, G. Lajoie, and R.J. Rylett. 2004 - Dec. Protein Kinase C Isoforms Differentially Phosphorylate Human Choline Acetyltransferase Regulating Its Catalytic Activity. Journal of Biological Chemistry 279 (50): 52059-52068.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Dobransky, T., A. Doherty-Kirby, G. Lajoie, and R.J. Rylett. 2004 - July. Hierarchical Phosphorylation of Choline Acetyltransferase by Protein Kinase-C and Regulation of Its Enzymatic Activity. Neurobiology of Aging 25: S525.
Type: Abstract

Kim, A.R., A. Doherty-Kirby, G. Lajoie, R.J. Rylett, and B.H. Shilton. 2005 - Mar. Two Methods for Large-Scale Purification of Recombinant Human Choline Acetyltransferase. Protein Expression and Purification 40 (1): 107-117.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Perdicakis, B., H.J. Montgomery, G.L. Abbott, D. Fishlock, G.A. Lajoie, J.G. Guillemette, and E. Jervis. 2005 - Jan. Photocontrol of Nitric Oxide Production in Cell Culture Using a Caged Isoform Selective Inhibitor. Bioorganic & Medicinal Chemistry 13 (1): 47-57.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Possmayer, F., K. Rodriguez-Capote, D. Manzanares, T. Haines, S.Y. Liu, and G. Lajoie. 2005 - Jan. Reactive Oxygen Species (Ros) Inactivation of Pulmonary Surfactant Involves Structural and Functional Alterations to Surfactant Proteins Spb and Sp-C. Biophysical Journal 88 (1): 577A-578A.
Type: Abstract

Simmons, D.A., D.J. Wilson, G.A. Lajoie, A. Doherty-Kirby, and L. Konermann. 2004 - Nov. Subunit Disassembly and Unfolding Kinetics of Hemoglobin Studied by Time-Resolved Electrospray Mass Spectrometry. Biochemistry 43 (46): 14792-14801.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Litchfield, D.W.

Olsten, M.E.K., D.A. Canton, C.J. Zhang, P.A. Walton, and D.W. Litchfield. 2004 - Oct. The Pleckstrin Homology Domain of Ck2 Interacting Protein-1 Is Required for Interactions and Recruitment of Protein Kinase Ck2 to the Plasma Membrane. Journal of Biological Chemistry 279 (40): 42114-42127.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Olsten, M.E.K., and D.W. Litchfield. 2004 - Dec. Order or Chaos? An Evaluation of the Regulation of Protein Kinase Ck2. Biochemistry and Cell Biology-Biochimie Et Biologie Cellulaire 82 (6): 681-693.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Olsten, M.E.K., J.E. Weber, and D.W. Litchfield. 2005 - June. Ck2 Interacting Proteins: Emerging Paradigms for Ck2 Regulation? Molecular and Cellular Biochemistry 274 (1-2): 115-124.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Stolk, M., E. Cooper, G. Vilk, D.W. Litchfield, and J.R. Hammond. 2005 - Mar. Subtype-Specific Regulation of Equilibrative Nucleoside Transporters by Protein Kinase Ck2. Biochemical Journal 386: 281-289.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Ma, B.

Han, Y.H., B. Ma, and K.Z. Zhang. 2005. An Automata Approach to Match Gapped Sequence Tags Against Protein Database. Implementation and Application of Automata 3317: 167-177.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Kisman, D., M. Li, B. Ma, and L. Wang. 2005 - Feb. Tpatternhunter: Gapped, Fast and Sensitive Translated Homology Search. Bioinformatics 21 (4): 542-544.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Li, M., X. Chen, X. Li, B. Ma, and P.M.B. Vitanyi. 2004 - Dec. The Similarity Metric. Ieee Transactions on Information Theory 50 (12): 3250-3264.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Ma, B., L.Y. Wu, and K.Z. Zhang. 2005. Improving the Sensitivity and Specificity of Protein Homology Search by Incorporating Predicted Secondary Structures. Computational Science - Iccs 2005, Pt 2. Lecture Notes in Computer Science. 3515. 960-967.
Type: Conference Proceedings

Ma, B., and K.Z. Zhang. 2005. On the Longest Common Rigid Subsequence Problem. Combinatorial Pattern Matching, Proceedings. Lecture Notes in Computer Science. 3537. 11-20.
Type: Conference Proceedings

Ma, B., K.Z. Zhang, and C.Z. Liang. 2005 - May. An Effective Algorithm for Peptide De Novo Sequencing From Ms/Ms Spectra. Journal of Computer and System Sciences 70 (3): 418-430.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Xu, J., D.G. Brown, M. Li, and B. Ma. 2004. Optimizing Multiple Spaced Seeds for Homology Search. Combinatorial Pattern Matching, Proceedings. Lecture Notes in Computer Science. 3109. 47-58.
Type: Conference Proceedings

Mclachlin, D.T.

Vogel, P.D., T. Hornung, D.T. Mclachlin, S.D. Dunn, E.J. Hustedt, and J.G. Wise. 2005 - Jan. The Second Stalk of the Fof1-Atpsynthase. Biophysical Journal 88 (1): 50A.
Type: Abstract

Meakin, S.O.

Liu, H.Y., J.I.S. Macdonald, T. Hryciw, C.H. Li, and S.O. Meakin. 2005 - May. Human Tumorous Imaginal Disc 1 (Tid1) Associates With Trk Receptor Tyrosine Kinases and Regulates Neurite Outgrowth in Nnr5-Trka Cells. Journal of Biological Chemistry 280 (20): 19461-19471.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Robinson, K.N., K. Manto, R.J. Buchsbaum, J.I.S. Macdonald, and S.O. Meakin. 2005 - Jan. Neurotrophin-Dependent Tyrosine Phosphorylation of Ras Guanine-Releasing Factor 1 and Associated Neurite Outgrowth Is Dependent on the Hike Domain of Trka. Journal of Biological Chemistry 280 (1): 225-235.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Petersen, N.O.

Kim, P.S.G., N.O. Petersen, T.K. Sham, and Y.F. Hu. 2004 - July. Soft X-Ray Excited Optical Luminescence (Xeol) Studies of Fluorescein Isothiocyanate (Fitc) and Fitc-Labeled Proteins. Chemical Physics Letters 392 (1-3): 44-49.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Lee, C.C., and N.O. Petersen. 2004 - Oct. The Triple Layer Model: a Different Perspective on Lipid Bilayers. Journal of the Chinese Chemical Society 51 (5B): 1183-1191.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Nohel, A., E. Keating, T.M. Underhill, P. Knaus, and N.O. Petersen. 2005 - Feb. Dynamics and Interaction of Caveolin-1 Isoforms With Bmp-Receptors. Journal of Cell Science 118 (3): 643-650.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Panda, A.K., K. Nag, R.R. Harbottle, F. Possmayer, and N.O. Petersen. 2004 - Oct. Thermodynamic Studies on Mixed Molecular Langmuir Films Part 2. Mutual Mixing of Dppc and Bovine Lung Surfactant Extract With Long-Chain Fatty Acids. Colloids and Surfaces a-Physicochemical and Engineering Aspects 247 (1-3): 9-17.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Possmayer, F.N.K., K. Rodriguez-Capote, A.K. Panda, L. Frederick, S.A. Hearn, N.O. Petersen, S. Schurch, and F. Possmayer. 2004 - Dec. Disparate Effects of Two Phosphatidylcholine Binding Proteins, C-Reactive Protein and Surfactant Protein a, on Pulmonary Surfactant Structure and Function. American Journal of Physiology-Lung Cellular and Molecular Physiology 287 (6): L1145-L1153.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Rahman, L.N., N. Keating, H. Abeyagoonasekara, A. Nohe, and N.O. Petersen. 2005 - Jan. Analysis of the Composition of the Adaptor Protein-2. Biophysical Journal 88 (1): 398A.
Type: Abstract

Young, K., K. Macewan, M. Dean, N.O. Petersen, and A. Nohe. 2005 - Jan. Dynamics of Caveolin-1 Isoforms. Biophysical Journal 88 (1): 207A.
Type: Abstract

Pickering, J.G.

Fera, E., C. O'neil, W. Lee, S.H. Li, and J.G. Pickering. 2004 - Aug. Fibroblast Growth Factor-2 and Remodeled Type I Collagen Control Membrane Protrusion in Human Vascular Smooth Muscle Cells - Biphasic Activation of Rac1. Journal of Biological Chemistry 279 (34): 35573-35582.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Leung, W.C.Y., A. Lawrie, S. Demaries, H. Massaeli, A. Burry, S. Yablonsky, J.M. Sarjeant, E. Fera, E. Rassart, J.G. Pickering, and M. Rabinovitch. 2004 - July. Apolipoprotein D and Platelet-Derived Growth Factor-Bb Synergism Mediates Vascular Smooth Muscle Cell Migration. Circulation Research 95 (2): 179-186.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Nong, Z.X., C. O'neil, M. Lei, Q.P. Feng, and J.G. Pickering. 2004 - Oct. Collagen Degradation Is Essential for Effective Fibrotic Repair Following Myocardial Infarction. Circulation 110 (17): 26.
Type: Abstract

Possmayer, F.

Panupinthu, N., F. Possmayer, S.M. Sims, and S.J. Dixon. 2004 - Oct. P2x7 Nucleotide Receptors Induce Membrane Blebbing in Osteoblasts Through a Pathway Involving Lysophosphatidic Acid. Journal of Bone and Mineral Research 19: S54.
Type: Abstract

Serrano, A.G., A. Cruz, K. Rodriguez-Capote, F. Possmayer, and J. Perez-Gil. 2005 - Jan. Intrinsic Structural and Functional Determinants Within the Amino Acid Sequence of Mature Pulmonary Surfactant Protein Sp-B. Biochemistry 44 (1): 417-430.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Rodenhiser, D.I.

Butcher, D.T., D.N. Mancini-Dinardo, T.K. Archer, and D.I. Rodenhiser. 2004 - Sept. Dna Binding Sites for Putative Methylation Boundaries in the Unmethylated Region of the Brca1 Promoter. International Journal of Cancer 111 (5): 669-678.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Rozmahel, R.

Mastrangelo, P., P.M. Mathews, M.A. Chishti, S.D. Schmidtt, Y.J. Gu, J. Yang, M.J. Mazzella, J. Coomaraswamy, P. Horne, B. Strome, H. Pelly, G. Levesque, C. Ebeling, Y. Jiang, R.A. Nixon, R. Rozmahel, P.E. Fraser, P. St George-Hyslop, G.A. Carlson, and D. Westaway. 2005 - June. Dissociated Phenotypes in Presenilin Transgenic Mice Define Functionally Distinct Gamma-Secretases. Proceedings of the National Academy of Sciences of the United States of America 102 (25): 8972-8977.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Rupar, C.A.

Cipriano, L.E., C.A. Rupar, and G.S. Zaric. 2005 - May-2005 - June. The Cost-Effectiveness of Expanding Newborn Screening for Inherited Metabolic Disorders Using Tandem Mass Spectrometry. Value in Health 8 (3): 298.
Type: Abstract

Waters, P.J., M. Khashu, Y. Lillquist, C. Senger, A. Mattman, M. Demos, A. Rupar, P. Scott, N. Blau, and H.D. Vallance. 2005 - Mar. Neonatal Hyperphenylalaninemia, Perinatal Hemochromatosis, and Renal Tubulopathy: a Unique Patient or a Novel Metabolic Disorder? Molecular Genetics and Metabolism 84 (3): 239.
Type: Abstract

Shaw, G.S.

Merkley, N., and G.S. Shaw. 2004 - Nov. Letter to the Editor: Assignment of the H-1, C-13 and N-15 Resonances of the Class Ii E2 Conjugating Enzyme, Ubc1. Journal of Biomolecular Nmr 30 (3): 369-370.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Merkley, N., and G.S. Shaw. 2004 - Nov. Solution Structure of the Flexible Class Ii Ubiquitin-Conjugating Enzyme Ubc1 Provides Insights for Polyubiquitin Chain Assembly. Journal of Biological Chemistry 279 (45): 47139-47147.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Shilton, B.H.

Skerjanc, I.S.

Gianakopoulos, P.J., and I.S. Skerjanc. 2005 - June. Hedgehog Signaling Induces Cardiomyogenesis in P19 Cells. Journal of Biological Chemistry 280 (22): 21022-21028.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Trevithick, J.R.

Trevithick, J.R., D. Massel, J.M. Robertson, S. Tomany, and R. Wall. 2004 - Dec. Model Study of Areds Antioxidant Supplementation of Amd Compared to Visudyne: a Dominant Strategy? Ophthalmic Epidemiology 11 (5): 337-346.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Turley, E.A.

Nedvetzki, S., E. Gonen, N. Assayag, R. Reich, R.O. Williams, R.L. Thurmond, J.F. Huang, B.A. Neudecker, F.S. Wang, E.A. Turley, and D. Naor. 2004 - Dec. Rhamm, a Receptor for Hyaluronan-Mediated Motility, Compensates for Cd44 in Inflamed Cd44-Knockout Mice: a Different Interpretation of Redundancy. Proceedings of the National Academy of Sciences of the United States of America 101 (52): 18081-18086.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Turley, E.A., and J.B. Mccarthy. 2004 - Aug. Population Dynamics and Clonal Dominance in Tumors? Blood 104 (4): 909-910. Editorial Material.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Yeung, K.K.C.

Nesbitt, C.A., J.T.M. Lo, and K.K.C. Yeung. 2005 - May. Over 1000-Fold Protein Preconcentration for Microliter-Volume Samples at a Ph Junction Using Capillary Electrophoresis. Journal of Chromatography a 1073 (1-2): 175-180.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Zhang, H.X., and K.K.C. Yeung. 2004 - Nov. Nanoliter-Volume Selective Sampling of Peptides Based on Isoelectric Points for Maldi-Ms. Analytical Chemistry 76 (22): 6814-6818.
Type: Journal Article
Refereed/Peer-Reviewed: YES NO (Please circle)

Zhang, K.Z.

Contact Leslie Thomas-Smith, Western Archives at leadersinlearning@uwo.ca with questions or comments.
Last Updated 2006/01/19